FamLinkX – A software for X-chromosomal markers

---

Home Download Databases Getting started Manual Contact Help

---

Databases

The files below are prepared based on data given in the references. Please keep in mind that we have not performed quality control of the submitted data.

Send us a request on new databases or merging of several of the databases below.

All data for the Decaplex kit is obtained via Supplementary data in Gusmão et al.

Frequency databases (haplotypes and allele frequencies)

Databases may be found here or downloaded in the tables below. Size refers to the number of male haplotypes in the publication.

Please note that several populations can appear twice (different sources) and in continental databases as well.

Argus X12

Population	Size	Database	Publication	Comment	Kit
Sweden	652	SWE	Tillmar A.		Argus X12
Norway	631	NOR	Bergseth et al.		Argus X12
Czech Repubic	307	CZE	Zidkova et al.		Argus X12
Germany	1037	GER	Edelmann et al.		Argus X12
Greece	121	GRE	Tomas et al.		Argus X12
Italian	200	ITA	Bini et al.		Argus X12
Sardinia	316	SAR	Robino et al.		Argus X12
Serbia	220	SER	Veselinovic et al.		Argus X12
Hungary	219	HUN	Horvath et al.		Argus X12
Portugal	150	POR	Caine et al.		Argus X12
United Arab Emirates	501	UAE	Almarri et al.		Argus X12
Somali	673	SOM	Kling et al.		Argus X12
Egypt	257	EGY	Elakkary et al.		Argus X12
India	100	IND	Shrivastava et al.		Argus X12
Bangladesh	102	BAN	Sufian et al.		Argus X12
Philippines	143	PHI	Salvador et al.		Argus X12
China	263	CHI	Guo F.		Argus X12
China (Korea)	257	KOR	Xiao-na et al.	No micro-variants present	Argus X12
Japan	438	JAP	Uchigasaki et al.		Argus X12
Thailand	282	THA	Vongpaisarnsin et al.		Argus X12
Mexico	933	MEX	Cortés-Trujillo et al.		Argus X12
Argentina	912	ARG	Garcia et al.		Argus X12
Northern Europe	2624	NEU	-	SWE, NOR, GER, CZE	Argus X12
Eastern Asia	1126	EAS	-	PHI, CHI, JAP, THA	Argus X12
Southern Europe	1009	SEU	-	POR, SER, SAR, ITA GRE	Argus X12
Belarus	362	BEL	Rebala et al.		Argus X12
China	1620	CHI2	Guo F.; Uchigasaki et al.;Tao et al.;Xing et al.;Li et al.		Argus X12
Croatia	451	CRO	Crnjac et al.;Mrsic et al.;Mrsic et al.		Argus X12
India	202	IND2	Kakkar et al.; Shrivastava et al.		Argus X12
Malaysia	162	MAL	Samejima et al.		Argus X12
Thailand	340	THA2	Vongpaisarnsin et al.;Khacha-ananda et al.		Argus X12
Italy	946	ITA2	Bini et al.;Ferragut et al.;Robino et al.; Gusmão et al.		Argus X12
Spain	492	SPA	Ferragut et al.;Ferragut et al.; Pinto et al.; Pinto et al.		Argus X12
Eritrea	235	ERI	Bini et al.		Argus X12
Turkey	163	TUR	Kalaoglu et al.;Poulsen et al.		Argus X12
Borneo	129	BOR	Hakim et al.		Argus X12
Argentina	2232	ARG2	Ferragut et al.;Pinto et al.; Garcia et al.;Gusmão et al.		Argus X12
Iran	129	IRA	Poulsen et al.		Argus X12
Albania	112	ALB	Poulsen et al.		Argus X12
Slovenia	135	SLO	Poulsen et al.		Argus X12
Guinea Bissau	334	GUI	Gomes et al.		Argus X12
Germany	1705	GER2	Edelmann et al.;Hering et al.		Argus X12
Portugal	873	POR2	Gusmão et al.; Pinto et al.; Pinto et al.		Argus X12
Dominican_Republic	132	DOM	Gusmão et al.		Argus X12
Brazil	892	BRA	Pinto et al.; Gusmão et al.		Argus X12
Colombia	151	COL	Gusmão et al.		Argus X12
Ecuador	414	ECU	Pinto et al.;Flores-Espinoza et al.		Argus X12
Europe	6272	EUR		BEL, CRO, CZE, ITA2, SER, SPA, ALB, SLO, GER2, POR2, SWE	Argus X12
Asia	3126	ASI		CHI2, PHI, IND2, BAN, MAL, THA2, JAP, BOR	Argus X12
Africa	713	AFR		IVR, MOR, ERI, GUI	Argus X12
Asia_Middle_East	941	ME		TUR, IRA; IRQ, UAE	Argus X12
South America	3681	SAM		ARG2, BRA, COL, ECU	Argus X12
North America	1063	NAM		DOM, MEX	Argus X12

Decaplex

Population	Size	Database	Publication	Comment	Kit
Argentina	1312	ARG	Gusmão et al.; Glesmann et al.; Toscanini et al.		Decaplex
Brazil	3038	BRA	Gusmão et al. ;Martins et al.;Martins et al.;Caine et al.		Decaplex
Colombia	1384	COL	Prieto-Fernandez et al. ; Gusmão et al.;Martinez et al.;Lopez et al.;Rincón et al.		Decaplex
Costa Rica	294	COS	Gusmão et al.		Decaplex
Ecuador	272	ECU	Gusmão et al. ;Baeta et al.		Decaplex
El Salvador	51	ELS	Baeta et al.		Decaplex
France	179	FRA	Prieto-Fernandez et al.		Decaplex
Guatemala	140	GUA	Baeta et al.		Decaplex
Guiné Bissau	77	GUI	Gusmão et al.		Decaplex
Ireland	100	IRE	Prieto-Fernandez et al.		Decaplex
Italy	406	ITA	Gusmão et al.		Decaplex
Macau	46	MAC	Gusmão et al.		Decaplex
Malawi	47	MAL	Prieto-Fernandez et al.		Decaplex
Morocco	142	MOR	Prieto-Fernandez et al.		Decaplex
Nicaragua	159	NIC	Baeta et al.		Decaplex
Nigeria	218	NIG	Gomes et al.		Decaplex
Panama	54	PAN	Baeta et al.		Decaplex
Peru	276	PER	Gusmão et al.		Decaplex
Portugal	1623	POR	Gusmão et al. ;Valente et al.; Pereira et al.;Prieto-Fernandez et al.		Decaplex
Spain	1952	SPA	Prieto-Fernandez et al. Gusmão et al.;Baeta et al.		Decaplex
Thailand	138	THA	Prieto-Fernandez et al.		Decaplex
Uganda	117	UGA	Gomes et al.		Decaplex
Venezuela	400	VEN	Gusmão et al.		Decaplex
South America	6682	SAM	Gusmão et al.;Glesmann et al.;Toscanini et al.; Martins et al.; Martins et al.; Caine et al.;Prieto-Fernandez et al. Martinez et al.; Lopez et al.; Rincón et al.; Baeta et al.		Decaplex
Central America	698	CAM	Gusmão et al.; Baeta et al.		Decaplex
Africa	474	AFR	Prieto-Fernandez et al.; Gusmão et al.; Gomes et al.; Gomes et al.		Decaplex
Europe	4260	EUR	Prieto-Fernandez et al. ;Gusmão et al.; Valente et al.; Pereira et al.;Prieto-Fernandez et al.; Baeta et al.		Decaplex
Asia	184	ASI	Gusmão et al.; Prieto-Fernandez et al.		Decaplex
North Africa	142	NAFR	Prieto-Fernandez et al.		Decaplex

FORCE (map-file)

Population	Size	Database	Publication	Comment	Kit
Africa		AFR	Sudamant et al.	Details on populations	FORCE X-SNPs
Europe		EUR	Sudamant et al.	Details on populations	FORCE X-SNPs
Eastern Asia		EAS	Sudamant et al.	Details on populations	FORCE X-SNPs
South central Asia		SAS	Sudamant et al.	Details on populations	FORCE X-SNPs
South America		AMR	Sudamant et al.	Details on populations	FORCE X-SNPs

You may send comments to help@famlink.se